BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024C12LP1|AL428198
(820 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1532 1201 0.0
>3x_Contig1532
Length = 7463
Score = 1201 bits (597), Expect = 0.0
Identities = 617/623 (99%), Gaps = 2/623 (0%)
Strand = Plus / Plus
Query: 1 agttagagggtacttcggtcaagatcacaaaatacagagaaacgatcatgtmgaaaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2077 agttagagggtacttcggtcaagatcacaaaatacagagaaacgatcatgtcgaaaaaca 2136
Query: 61 aagaaatcaacagactttccagattattgaaccaaagccaagtctataatcctcgcctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2137 aagaaatcaacagactttccagattattgaaccaaagccaagtctataatcctcgcctct 2196
Query: 121 ctagaccaacttccgtgccatctgcatcggtcaggaagccatttatttcaagacagttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2197 ctagaccaacttccgtgccatctgcatcggtcaggaagccatttatttcaagacagttac 2256
Query: 181 actcagtcggattccaacatgttaaacacattaggaatacttgctacaaaggttcttaaa 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2257 actc-gtcggattccaacatgttaaacacattaggaatacttgctacaaaggttcttaaa 2315
Query: 241 gaggaacaaaatccggaaaatggaagcattcatgggtcgacactccaacattctccaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2316 gaggaacaaaatccggaaaatggaagcattcatgggtcgacactccaacattctccaatt 2375
Query: 301 gaagacaagccagagaatcttgataataccgaatctgacatctctcatgatagtactcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2376 gaagacaagccagagaatcttgataataccgaatctgacatctctcatgatagtactcag 2435
Query: 361 cttgtgaatcatagccagcagtttaataatggacttagtccctcaacagcaaacatggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2436 cttgtgaatcatagccagcagtttaataatggacttagtccctcaacagcaaacatggtg 2495
Query: 421 actccagccgcatcagttccagcagcgcag-atttaccaagtctgagtacggtatcagag 479
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 2496 actccagccgcatcagttccagcagcgcagcatttaccaagtctgagtacggtatcagag 2555
Query: 480 gtgacacctgattcacatttgattaggatcaacagcagttcaaatcagaaaatagagcgt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2556 gtgacacctgattcacatttgattaggatcaacagcagttcaaatcagaaaatagagcgt 2615
Query: 540 cctgaactgcctatattgcatctcaataggccatcgcttccgaaaggtgcggcactacca 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2616 cctgaactgcctatattgcatctcaataggccatcgcttccgaaaggtgcggcactacca 2675
Query: 600 aaatthcggaktattaatacagc 622
||||| |||| | ||||||||||
Sbjct: 2676 aaattacggagttttaatacagc 2698
Score = 298 bits (148), Expect = 1e-80
Identities = 165/176 (93%)
Strand = Plus / Plus
Query: 645 tgtamgabcmtacwctttmtttgtttttaccccagagttattwttctrtttcttattttc 704
|||| || | ||| |||| ||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 2722 tgtaagaacatactctttatttgtttttaccccagagttattattctatttcttattttc 2781
Query: 705 gtctgcaggaagaccaaatgacaataataacacataaaartaaaagaaacagacgtcgtt 764
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2782 gtctgcaggaagaccaaatgacaataataacacataaaaataaaagaaacagacgtcgtt 2841
Query: 765 tctgccgaaccacgccaawatcacggttcgactacagaaagcgtaacctgcttgtc 820
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2842 tctgccgaaccacgccaatgacacggttcgactacagaaagcgtaacctgcttgtc 2897
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4924
Number of Sequences: 1807
Number of extensions: 4924
Number of successful extensions: 97
Number of sequences better than 1.0e-20: 1
length of query: 820
length of database: 10,358,551
effective HSP length: 16
effective length of query: 804
effective length of database: 10,329,639
effective search space: 8305029756
effective search space used: 8305029756
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)